Lowry attended the University at Lewisburg (later renamed Bucknell University), where he became a professor of literature. He was ordained as a Baptist minister and pastored at West Chester, Pennsylvania; Bloomingdale Baptist Church, New York City; Hanson Place Baptist Church, Brooklyn, New York; First Baptist Church, Lewisburg, Pennsylvania; and Park Avenue Baptist Church, Plainfield, New Jersey. He also worked as a music editor at the Biglow Publishing Company, and helped found the Sixth Avenue Baptist Church in New York City. He wrote about 500 Gospel tunes, and jointly edited the following volumes:
- Happy Voices, 1865
- Gospel Melodies, 1868
- Bright Jewels (New York: Biglow & Main, 1869)
- Pure Gold, 1871
- Royal Diadem, 1873
- Temple Anthems, 1873
- Hymn Service, 1871, 1872 & 1873
- Royal Diadem for the Sunday School, with Howard Doane (New York: Biglow & Main: 1873)
- Tidal Wave, 1874
- Brightest and Best, with Howard Doane (New York: Biglow & Main: 1875)
- Welcome Tidings: A New Collection of Sacred Songs for the Sunday School, with Howard Doane & Ira Sankey (New York: Biglow & Main, 1877)
- Chautauqua Carols, 1878
- Gospel Hymn and Tune Book, with Howard Doane (Philadelphia, Pennsylvania: 1879)
- Hymn Service for the Sunday School, with Howard Doane, D. A. Whedon & John H. Vincent (New York: Biglow & Main: 1879)
- Good as Gold, with Howard Doane (New York: Biglow & Main: 1880)
- Our Glad Hosannas, 1882
- Joyful Lays, with Howard Doane (New York: Biglow & Main,1884)
- The Glad Refrain, with Howard Doane (New York: Biglow & Main, 1886)
- Select Gems, with Howard Doane (Philadelphia, Pennsylvania: American Baptist Publication Society, 1889)